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  5. Cz07g05080.t1

Cz07g05080.t1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0011239 (OrthoFinder) Phylogenetic Tree(s): OG0011239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g05080.t1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000014.1_cds_PRW39135.1_2492 PRW39135 Putative E3 ubiquitin ligase complex SCF subunit sconB 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 149 180
IPR001680 WD40_repeat 308 323
No external refs found!