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  5. Cz07g01230.t1

Cz07g01230.t1


Description : Redoxin [Interproscan].


Gene families : OG_01_0000516 (OrthoFinder) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g01230.t1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
PTI_17G01230.1 No alias Redoxin [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54367 54367 Redoxin [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016556 mRNA modification IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0080009 mRNA methylation IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013740 Redoxin 44 197
No external refs found!