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  5. Cz07g01040.t1

Cz07g01040.t1


Description : Pentapeptide repeat [Interproscan].


Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g01040.t1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
XM_002505560.1 MICPUN_54755, 54755 Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder
XM_003063673.1 MicpuC2_65966, 65966 Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 73 107
IPR001646 5peptide_repeat 34 65
No external refs found!