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  5. Cz07g00160.t1

Cz07g00160.t1


Description : Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ, GTPase domain [Interproscan].


Gene families : OG_01_0000699 (OrthoFinder) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g00160.t1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
EOD06593 No alias Alpha-tubulin [Ensembl]. 0.02 OrthoFinder
EOD12704 No alias Alpha-tubulin [Ensembl]. 0.02 OrthoFinder
EOD15554 No alias Alpha-tubulin [Ensembl]. 0.02 OrthoFinder
EOD22056 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
OT_12G01250.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
Sro102_g052160.1 Contig319.g4260 Tubulin alpha chain (Fragment) 0.01 OrthoFinder
Sro1718_g293350.1 Contig3856.g29683 Tubulin alpha chain (Fragment) 0.01 OrthoFinder
TP09G01530.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
XM_002507964.1 MICPUN_94939, 94939 Alpha tubulin 2 (TUA2) 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58554.1_7753 PRW58554 Tubulin alpha chain 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495544.1_1542 KAA8495544 Tubulin alpha-2 chain 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
No external refs found!