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  5. Cz06g30080.t1

Cz06g30080.t1


Description : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; CobW/HypB/UreG, nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000164 (OrthoFinder) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g30080.t1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre12.g536900 30793606 No description available 0.02 OrthoFinder
Dusal.0593s00008.1 33188033 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34073.1_3147 PRW34073 Cobalamin synthesis P47K 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 292 349
IPR003495 CobW/HypB/UreG_dom 2 168
No external refs found!