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  5. Cz06g28190.t1

Cz06g28190.t1


Description : Pleckstrin homology domain; PLAT/LH2 domain [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g28190.t1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Dusal.0285s00022.1 33192887 HELP [Interproscan]. 0.03 OrthoFinder
Vocar.0015s0354.1 32898827 WD40 repeat; HELP; PLAT/LH2 domain [Interproscan]. 0.02 OrthoFinder
Vocar.0029s0133.1 32887586 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0043s0042.1 32886885 WD40 repeat; HELP [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000936.1_cds_GFH16043.1_10520 HaLaN_12389, GFH16043 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001849 PH_domain 87 216
IPR001024 PLAT/LH2_dom 1471 1581
IPR001024 PLAT/LH2_dom 1342 1449
IPR001024 PLAT/LH2_dom 546 648
IPR001024 PLAT/LH2_dom 1215 1321
IPR001024 PLAT/LH2_dom 672 774
IPR001024 PLAT/LH2_dom 1095 1197
IPR001024 PLAT/LH2_dom 293 401
IPR001024 PLAT/LH2_dom 1722 1830
IPR001024 PLAT/LH2_dom 1990 2108
IPR001024 PLAT/LH2_dom 1595 1707
IPR001024 PLAT/LH2_dom 795 907
IPR001024 PLAT/LH2_dom 925 1007
IPR001024 PLAT/LH2_dom 1859 1961
IPR001024 PLAT/LH2_dom 425 529
No external refs found!