Cz06g26070.t1

Description : Sec23/Sec24, trunk domain; Sec23/Sec24, helical domain; Zinc finger, Sec23/Sec24-type; Sec23/Sec24 beta-sandwich [Interproscan].

Gene families : OG_01_0000893 (OrthoFinder) Phylogenetic Tree(s): OG0000893_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz06g26070.t1
Cluster	HCCA: Cluster_157

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000829.3	tig00000829_g4645.t1	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.04	OrthoFinder
Cre01.g035850	30788608, SEC24B	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	OrthoFinder
Cre02.g091150	30786099, SEC24A	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	OrthoFinder
OT_12G02410.1	No alias	Sec23/Sec24 beta-sandwich; Sec23/Sec24, trunk domain;...	0.03	OrthoFinder
Vocar.0001s0725.1	32884529	Sec23/Sec24, trunk domain; Sec23/Sec24, helical domain;...	0.02	OrthoFinder
Vocar.0001s1208.1	32884601	Zinc finger, Sec23/Sec24-type; Sec23/Sec24, helical...	0.02	OrthoFinder
XM_003055317.1	MicpuC2_49909, 49909	Sec23/Sec24 beta-sandwich; Sec23/Sec24, helical domain;...	0.02	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW60099.1_6260	PRW60099	Transport Sec24-like protein	0.03	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499730.1_8683	KAA8499730	Protein transport protein Sec24-like	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Enrichment
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	Enrichment
CC	GO:0000502	proteasome complex	IEP	Enrichment
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Enrichment
MF	GO:0004565	beta-galactosidase activity	IEP	Enrichment
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Enrichment
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Enrichment
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Enrichment
BP	GO:0006401	RNA catabolic process	IEP	Enrichment
BP	GO:0006402	mRNA catabolic process	IEP	Enrichment
BP	GO:0006606	protein import into nucleus	IEP	Enrichment
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Enrichment
BP	GO:0006913	nucleocytoplasmic transport	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
CC	GO:0009341	beta-galactosidase complex	IEP	Enrichment
BP	GO:0009889	regulation of biosynthetic process	IEP	Enrichment
BP	GO:0009892	negative regulation of metabolic process	IEP	Enrichment
BP	GO:0009894	regulation of catabolic process	IEP	Enrichment
BP	GO:0010468	regulation of gene expression	IEP	Enrichment
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
BP	GO:0010629	negative regulation of gene expression	IEP	Enrichment
BP	GO:0015858	nucleoside transport	IEP	Enrichment
MF	GO:0015925	galactosidase activity	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016757	glycosyltransferase activity	IEP	Enrichment
MF	GO:0016758	hexosyltransferase activity	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0019222	regulation of metabolic process	IEP	Enrichment
BP	GO:0019439	aromatic compound catabolic process	IEP	Enrichment
BP	GO:0022406	membrane docking	IEP	Enrichment
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Enrichment
CC	GO:0030131	clathrin adaptor complex	IEP	Enrichment
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
BP	GO:0031323	regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Enrichment
BP	GO:0031329	regulation of cellular catabolic process	IEP	Enrichment
BP	GO:0033365	protein localization to organelle	IEP	Enrichment
BP	GO:0034504	protein localization to nucleus	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Enrichment
BP	GO:0042176	regulation of protein catabolic process	IEP	Enrichment
BP	GO:0043085	positive regulation of catalytic activity	IEP	Enrichment
BP	GO:0043487	regulation of RNA stability	IEP	Enrichment
BP	GO:0043488	regulation of mRNA stability	IEP	Enrichment
BP	GO:0044093	positive regulation of molecular function	IEP	Enrichment
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Enrichment
BP	GO:0044528	regulation of mitochondrial mRNA stability	IEP	Enrichment
BP	GO:0046700	heterocycle catabolic process	IEP	Enrichment
BP	GO:0048278	vesicle docking	IEP	Enrichment
BP	GO:0048519	negative regulation of biological process	IEP	Enrichment
BP	GO:0050789	regulation of biological process	IEP	Enrichment
BP	GO:0050790	regulation of catalytic activity	IEP	Enrichment
BP	GO:0050794	regulation of cellular process	IEP	Enrichment
BP	GO:0051169	nuclear transport	IEP	Enrichment
BP	GO:0051170	import into nucleus	IEP	Enrichment
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0051246	regulation of protein metabolic process	IEP	Enrichment
BP	GO:0051252	regulation of RNA metabolic process	IEP	Enrichment
BP	GO:0051640	organelle localization	IEP	Enrichment
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Enrichment
BP	GO:0061013	regulation of mRNA catabolic process	IEP	Enrichment
MF	GO:0061608	nuclear import signal receptor activity	IEP	Enrichment
BP	GO:0065007	biological regulation	IEP	Enrichment
BP	GO:0065008	regulation of biological quality	IEP	Enrichment
BP	GO:0065009	regulation of molecular function	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0072594	establishment of protein localization to organelle	IEP	Enrichment
BP	GO:0080090	regulation of primary metabolic process	IEP	Enrichment
CC	GO:0099023	vesicle tethering complex	IEP	Enrichment
BP	GO:0110154	RNA decapping	IEP	Enrichment
BP	GO:0110156	methylguanosine-cap decapping	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
BP	GO:0140029	exocytic process	IEP	Enrichment
BP	GO:0140056	organelle localization by membrane tethering	IEP	Enrichment
MF	GO:0140104	molecular carrier activity	IEP	Enrichment
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Enrichment
MF	GO:0140597	protein carrier activity	IEP	Enrichment
BP	GO:1901264	carbohydrate derivative transport	IEP	Enrichment
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Enrichment
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Enrichment
BP	GO:1901642	nucleoside transmembrane transport	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Enrichment
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Enrichment
CC	GO:1905368	peptidase complex	IEP	Enrichment
CC	GO:1905369	endopeptidase complex	IEP	Enrichment
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006896	Sec23/24_trunk_dom	424	662
IPR006895	Znf_Sec23_Sec24	349	387
IPR006900	Sec23/24_helical_dom	764	864
IPR012990	Sec23_24_beta_S	667	750

External Links

No external refs found!

Cz06g26070.t1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation