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  5. Cz06g16160.t1

Cz06g16160.t1


Description : R3H domain; DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like, AAA domain [Interproscan].


Gene families : OG_01_0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g16160.t1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000014.1_cds_PRW39071.1_2552 PRW39071 DNA-binding SMUBP-2 isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 317 535
IPR001374 R3H_dom 2 41
IPR041679 DNA2/NAM7-like_C 544 749
No external refs found!