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  5. Cz06g13140.t1

Cz06g13140.t1


Description : Multi antimicrobial extrusion protein [Interproscan].


Gene families : OG_01_0000080 (OrthoFinder) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g13140.t1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.15 tig00000076_g2315.t1 Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder
Cpa|evm.model.tig00020537.49 tig00020537_g10271.t1 Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder
Cre01.g007901 30789348 Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder
Cre10.g445850 30790079 Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder
Cre12.g499700 30793636 Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder
Dusal.0388s00014.1 33197667 Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
Dusal.2268s00001.1 33203467 Multi antimicrobial extrusion protein [Interproscan]. 0.03 OrthoFinder
OT_17G00210.1 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
PTI_06G04300.1 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3203.1 3203.1 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_2089 2089 Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55349 55349 Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
XM_003055234.1 MicpuC2_50872, 50872 Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR002528 MATE_fam 306 468
IPR002528 MATE_fam 79 240
No external refs found!