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  5. Cz06g07100.t1

Cz06g07100.t1


Description : Hypothetical protein


Gene families : OG_01_0000377 (OrthoFinder) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g07100.t1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021589.16 tig00021589_g22722.t1 Serine/threonine-protein kinase Nek2 OS=Oryza sativa... 0.02 OrthoFinder
Cre10.g441200 30790096 RNA processing.RNA decay.deadenylation-dependent... 0.03 OrthoFinder
EOD26743 No alias Protein of unknown function (DUF3223); La-type HTH... 0.02 OrthoFinder
lcl|BLLF01003364.1_cds_GFH27142.1_21619 HaLaN_25415, GFH27142 RNA binding protein 0.01 OrthoFinder
lcl|BLLF01003838.1_cds_GFH28342.1_22819 HaLaN_26819, GFH28342 HTH La-type RNA-binding domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56866.1_9788 PRW56866 La-related 1A isoform X1 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45723.1_1269 PRW45723 La 1 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494867.1_3397 KAA8494867 Lupus La protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!