Cz06g05150.t1

Description : Small GTPase [Interproscan].

Gene families : OG_01_0000215 (OrthoFinder) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz06g05150.t1
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g560150	30793394	Vesicle trafficking.regulation of membrane tethering and...	0.04	OrthoFinder
OT_07G00770.1	No alias	Small GTPase [Interproscan].	0.02	OrthoFinder
PTI_05G00940.1	No alias	Small GTPase [Interproscan].	0.03	OrthoFinder
Sro76_g041730.1	Contig184.g2151	Ras-related protein Rab	0.01	OrthoFinder
TP03G05300.1	No alias	Small GTPase [Interproscan].	0.02	OrthoFinder
Transcript_contig_57007	57007	Small GTPase [Interproscan].	0.02	OrthoFinder
XM_003057392.1	MicpuC2_37396, 37396	Small GTPase [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60842.1_4468	PRW60842	Ras-related RABC1-like	0.02	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW60039.1_6259	PRW60039	Rab family GTPase	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Enrichment
CC	GO:0005739	mitochondrion	IEP	Enrichment
CC	GO:0005787	signal peptidase complex	IEP	Enrichment
CC	GO:0005839	proteasome core complex	IEP	Enrichment
BP	GO:0006465	signal peptide processing	IEP	Enrichment
BP	GO:0006694	steroid biosynthetic process	IEP	Enrichment
BP	GO:0008202	steroid metabolic process	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
BP	GO:0016125	sterol metabolic process	IEP	Enrichment
BP	GO:0016126	sterol biosynthetic process	IEP	Enrichment
BP	GO:0016485	protein processing	IEP	Enrichment
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
BP	GO:0043248	proteasome assembly	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
MF	GO:0070003	threonine-type peptidase activity	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Enrichment
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Enrichment
CC	GO:1905368	peptidase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	170

External Links

No external refs found!