- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Hypothetical protein
Gene families : OG_01_0000840 (OrthoFinder) Phylogenetic Tree(s): OG0000840_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000692.75 | tig00000692_g3273.t1 | Small RNA degrading nuclease 5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cre01.g036600 | 30789506 | Small RNA degrading nuclease 3 OS=Arabidopsis thaliana | 0.11 | OrthoFinder | |
| Cre14.g610663 | 30776194 | Small RNA degrading nuclease 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder | |
| OT_06G01920.1 | No alias | Exonuclease, RNase T/DNA polymerase III [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_03G03700.1 | No alias | Zinc finger, CCCH-type; Exonuclease, RNase T/DNA... | 0.12 | OrthoFinder | |
| Sro1151_g246730.1 | Contig4710.g35024 | Small RNA degrading nuclease | 0.11 | OrthoFinder | |
| TP14G01780.1 | No alias | Exonuclease, RNase T/DNA polymerase III [Interproscan]. | 0.07 | OrthoFinder | |
| XM_002507770.1 | MICPUN_84415, 84415 | Exonuclease, RNase T/DNA polymerase III [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000914.1_cds_GFH15881.1_10358 | HaLaN_12198, GFH15881 | Exonuclease domain-containing protein | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| MF | GO:0030975 | thiamine binding | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |