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  5. Cz06g00040.t1

Cz06g00040.t1


Description : Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase/oxidase C-terminal [Interproscan].


Gene families : OG_01_0000190 (OrthoFinder) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g00040.t1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.27 tig00000711_g3387.t1 Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza... 0.02 OrthoFinder
Cpa|evm.model.tig00021318.60 tig00021318_g20180.t1 Amino acid metabolism.degradation.branched-chain amino... 0.02 OrthoFinder
Cre06.g296400 30778744 Amino acid metabolism.degradation.branched-chain amino... 0.05 OrthoFinder
Cre16.g695100 30776858 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder
Sro1323_g262650.1 Contig273.g3511 Short/branched chain specific acyl-CoA dehydrogenase,... 0.04 OrthoFinder
Sro1843_g301120.1 Contig4701.g34960 Short/branched chain specific acyl-CoA dehydrogenase,... 0.03 OrthoFinder
Sro762_g198700.1 Contig3620.g28011 Isovaleryl-CoA dehydrogenase, mitochondrial 0.03 OrthoFinder
lcl|BLLF01000025.1_cds_GFH06166.1_643 HaLaN_00751, GFH06166 Ig-like domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity IEP Enrichment
MF GO:0009008 DNA-methyltransferase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0032775 DNA methylation on adenine IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 158 251
IPR009075 AcylCo_DH/oxidase_C 263 405
IPR013786 AcylCoA_DH/ox_N 43 154
No external refs found!