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  5. Cz05g34280.t1

Cz05g34280.t1


Description : Ribosomal protein L10e/L16 [Interproscan].


Gene families : OG_01_0002492 (OrthoFinder) Phylogenetic Tree(s): OG0002492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g34280.t1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001424.5 tig00001424_g8704.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder
Dusal.0318s00002.1 33185638 Ribosomal protein L10e/L16 [Interproscan]. 0.1 OrthoFinder
EOD11710 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.04 OrthoFinder
OT_03G04340.1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.09 OrthoFinder
PTI_18G02960.1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.09 OrthoFinder
Transcript_contig_89977 89977 Ribosomal protein L10e/L16 [Interproscan]. 0.03 OrthoFinder
Vocar.0033s0178.1 32886367 Ribosomal protein L10e/L16 [Interproscan]. 0.02 OrthoFinder
XM_002507165.1 MICPUN_93045, 93045 Ribosomal protein L10e/L16 [Interproscan]. 0.11 OrthoFinder
XM_003054845.1 MicpuC2_24102, 24102 Ribosomal protein L10e/L16 [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20682.1_5260 PRW20682 60S ribosomal L10-3 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 13 129
No external refs found!