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  5. Cz05g24190.t1

Cz05g24190.t1


Description : Translation elongation factor EFTu/EF1A, C-terminal; Transcription factor, GTP-binding domain [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cz05g24190.t1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cre06.g284750 30779093, EFG3 Protein biosynthesis.translation termination.eRF3... 0.03 OrthoFinder
Dusal.0036s00015.1 33190426 Transcription factor, GTP-binding domain; Translation... 0.04 OrthoFinder
EOD16607 No alias Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
SymbC1.scaffold9506.2 9506.2 Transcription factor, GTP-binding domain; Translation... 0.02 OrthoFinder
TP03G05750.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Vocar.0028s0032.1 32895657 Translation elongation factor EFTu/EF1A, C-terminal;... 0.03 OrthoFinder
XM_003060323.1 MicpuC2_60100, 60100 Elongation factor tu 0.02 OrthoFinder
XM_003060913.1 MicpuC2_49684, 49684 Transcription factor, GTP-binding domain; Translation... 0.03 OrthoFinder
lcl|BLLF01000300.1_cds_GFH10262.1_4739 HaLaN_05543, GFH10262 Tr-type G domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 574 681
IPR000795 T_Tr_GTP-bd_dom 242 475
No external refs found!