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  5. Cz05g20240.t1

Cz05g20240.t1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0005774 (OrthoFinder) Phylogenetic Tree(s): OG0005774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g20240.t1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020537.23 tig00020537_g10245.t1 No description available 0.02 OrthoFinder
EOD07405 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002503203.1 MICPUN_59363, 59363 WD40 repeat [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008810 cellulase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009251 glucan catabolic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0030243 cellulose metabolic process IEP Enrichment
BP GO:0030245 cellulose catabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044247 cellular polysaccharide catabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051275 beta-glucan catabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 109 129
IPR001680 WD40_repeat 638 675
IPR001680 WD40_repeat 481 517
IPR001680 WD40_repeat 567 597
IPR001680 WD40_repeat 520 557
IPR001680 WD40_repeat 391 432
IPR001680 WD40_repeat 136 169
No external refs found!