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  5. Cpa|evm.model.tig00001024.12

Cpa|evm.model.tig00001024.12 (tig00001024_g6321.t1)


Aliases : tig00001024_g6321.t1

No description available


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001024.12
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cre06.g303400 30779939, FAP16 No description available 0.01 OrthoFinder
Cz01g41160.t1 No alias WD40 repeat; HELP [Interproscan]. 0.02 OrthoFinder
Dusal.0100s00010.1 33202474 Hypothetical protein 0.01 OrthoFinder
Dusal.0177s00014.1 33189755 WD40 repeat; PLAT/LH2 domain [Interproscan]. 0.02 OrthoFinder
Dusal.0285s00022.1 33192887 HELP [Interproscan]. 0.02 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0017.1 32896445 WD40 repeat; HELP; Anaphase-promoting complex subunit 4,... 0.02 OrthoFinder
XM_002502455.1 MICPUN_58565, 58565 HELP; PLAT/LH2 domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003058024.1 MicpuC2_57171, 57171 PLAT/LH2 domain; Pleckstrin homology domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000417.1_cds_GFH11594.1_6071 HaLaN_07118, GFH11594 Lipoxygenase 0.01 OrthoFinder
lcl|BLLF01000435.1_cds_GFH11790.1_6267 HaLaN_07346, GFH11790 WD_REPEATS_REGION domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59716.1_6391 PRW59716 Lipoxygenase homology domain-containing 1 isoform B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 1678 1754
IPR001680 WD40_repeat 1620 1646
IPR001680 WD40_repeat 1359 1396
IPR001680 WD40_repeat 1247 1280
IPR001680 WD40_repeat 1869 1901
IPR005108 HELP 54 100
No external refs found!