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  5. Cz05g19240.t1

Cz05g19240.t1


Description : AP complex, mu/sigma subunit [Interproscan].


Gene families : OG_01_0003404 (OrthoFinder) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g19240.t1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.67 tig00020848_g14598.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre08.g371450 30773469, COPZ1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder
Dusal.2974s00001.1 33198179 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
PTI_18G00130.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold984.8 984.8 AP complex, mu/sigma subunit [Interproscan]. 0.01 OrthoFinder
TP06G02210.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
XM_002504171.1 MICPUN_107402, 107402 Hypothetical protein (COPZ) 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
BP GO:0042546 cell wall biogenesis IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 34 77
No external refs found!