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  5. Cz05g19110.t1

Cz05g19110.t1


Description : Ribosomal protein L11, N-terminal [Interproscan].


Gene families : OG_01_0003120 (OrthoFinder) Phylogenetic Tree(s): OG0003120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g19110.t1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.27 tig00001339_g8284.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 OrthoFinder
Cre12.g528750 30793215, RPL12 Protein biosynthesis.cytosolic ribosome.large subunit... 0.42 OrthoFinder
Dusal.3410s00001.1 33201679 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.03 OrthoFinder
EOD41717 No alias Ribosomal protein L11, C-terminal [Interproscan]. 0.13 OrthoFinder
OT_03G05460.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.18 OrthoFinder
PTI_14G02490.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.36 OrthoFinder
Sro82_g043980.1 Contig4032.g30989 60S ribosomal protein L12 (Fragment) 0.34 OrthoFinder
SymbC1.scaffold6598.3 6598.3 Ribosomal protein L11, C-terminal; Ribosomal protein... 0.03 OrthoFinder
SymbC1.scaffold7628.1 7628.1 Ribosomal protein L11, C-terminal; Ribosomal protein... 0.06 OrthoFinder
TP02G01920.1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.39 OrthoFinder
Vocar.0037s0035.1 32897589 Ribosomal protein L11, C-terminal; Ribosomal protein... 0.14 OrthoFinder
XM_002507253.1 MICPUN_106714, 106714 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.22 OrthoFinder
XM_003054785.1 MicpuC2_30629, 30629 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.11 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45184.1_1960 PRW45184 60S ribosomal L12-1 0.2 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495636.1_1634 KAA8495636 60S ribosomal protein L12 0.34 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 9 70
No external refs found!