1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz05g18010.t1

Cz05g18010.t1


Description : zinc finger of C3HC4-type, RING; SAP domain [Interproscan].


Gene families : OG_01_0000209 (OrthoFinder) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g18010.t1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Sro98_g050620.1 Contig3362.g26354 PHD 0.01 OrthoFinder
TP14G00530.1 No alias Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01002177.1_cds_GFH23023.1_17500 HaLaN_20571, GFH23023 SAP domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR003034 SAP_dom 427 460
No external refs found!