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  5. Cz05g10060.t1

Cz05g10060.t1


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0002755 (OrthoFinder) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g10060.t1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.40 tig00021357_g20766.t1 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana 0.11 OrthoFinder
Cre08.g373250 30773949, POA2 Protein degradation.26S proteasome.20S core... 0.16 OrthoFinder
Dusal.0724s00005.1 33190221 Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
EOD39539 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
OT_06G00220.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
PTI_25G01000.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
Sro63_g035860.1 Contig2778.g22351 Proteasome subunit alpha 0.18 OrthoFinder
TP22G01710.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.11 OrthoFinder
Transcript_contig_58673 58673 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
Vocar.0043s0030.1 32886890 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.03 OrthoFinder
XM_002500738.1 MICPUN_56599, 56599 Proteasome, subunit alpha/beta [Interproscan]. 0.11 OrthoFinder
XM_003059320.1 MicpuC2_49610, 49610 Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01002018.1_cds_GFH22338.1_16815 HaLaN_19789, GFH22338 Proteasome subunit alpha type 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44892.1_1655 PRW44892 20S proteasome alpha subunit B 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498323.1_7276 KAA8498323 Proteasome subunit alpha type-2-A 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 213
IPR000426 Proteasome_asu_N 6 28
No external refs found!