1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz05g09240.t1

Cz05g09240.t1


Description : SET domain; Rubisco LSMT, substrate-binding domain [Interproscan].


Gene families : OG_01_0000712 (OrthoFinder) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g09240.t1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
XM_002508478.1 MICPUN_97985, 97985 Set domain protein 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500067.1_9020 KAA8500067 Ribulose-1,5 bisphosphate carboxylase/oxygenase large... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 221 349
IPR001214 SET_dom 127 187
No external refs found!