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  5. Cz05g08120.t1

Cz05g08120.t1


Description : Zinc finger, RING-type; TPM domain [Interproscan].


Gene families : OG_01_0003452 (OrthoFinder) Phylogenetic Tree(s): OG0003452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g08120.t1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_56170 56170 TPM domain; Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 347 378
IPR007621 TPM_dom 88 192
No external refs found!