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  5. Cz05g07170.t1

Cz05g07170.t1


Description : Protein LOW PSII ACCUMULATION 1-like [Interproscan].


Gene families : OG_01_0001058 (OrthoFinder) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g07170.t1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cre10.g430150 30790156 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Dusal.0143s00003.1 33194278 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Dusal.0342s00014.1 33188890 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
Sro3104_g343840.1 Contig2425.g19840 Protein of unknown function (DUF3493) 0.02 OrthoFinder
Sro73_g040520.1 Contig3929.g30153 Protein of unknown function (DUF3493) 0.02 OrthoFinder
Transcript_contig_1368 1368 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0262.1 32883657 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.04 OrthoFinder
XM_003061472.1 MicpuC2_48291, 48291 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW55926.1_10192 PRW55926 LOW PSII ACCUMULATION chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
InterPro domains Description Start Stop
IPR021883 LPA1-like 59 135
No external refs found!