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  5. Cz05g04330.t1

Cz05g04330.t1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0002057 (OrthoFinder) Phylogenetic Tree(s): OG0002057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g04330.t1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021234.21 tig00021234_g19395.t1 No description available 0.02 OrthoFinder
Cre04.g217914 30791574, FAP57 No description available 0.02 OrthoFinder
EOD14713 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
OT_05G02080.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Vocar.0046s0007.1 32892978 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003057384.1 MicpuC2_25887, 25887 WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001074.1_cds_GFH16945.1_11422 HaLaN_13468, GFH16945 WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003588.1_cds_GFH27713.1_22190 HaLaN_26083, GFH27713 WD40 repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 556 592
IPR001680 WD40_repeat 440 470
No external refs found!