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  5. Cz05g04170.t1

Cz05g04170.t1


Description : Linker histone H1/H5, domain H15 [Interproscan].


Gene families : OG_01_0000394 (OrthoFinder) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g04170.t1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.71 tig00020780_g13821.t1 No description available 0.02 OrthoFinder
Cre13.g567450 30784737, HON1 Chromatin organisation.histones.H1 linker histone 0.11 OrthoFinder
Dusal.0093s00006.1 33185352 Linker histone H1/H5, domain H15 [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00024.1 33185320 Linker histone H1/H5, domain H15 [Interproscan]. 0.03 OrthoFinder
Dusal.0152s00004.1 33186207 Linker histone H1/H5, domain H15 [Interproscan]. 0.03 OrthoFinder
Dusal.0165s00001.1 33193357 Linker histone H1/H5, domain H15 [Interproscan]. 0.03 OrthoFinder
Dusal.0322s00007.1 33197815 Linker histone H1/H5, domain H15 [Interproscan]. 0.05 OrthoFinder
Sro178_g078230.1 Contig275.g3548 Linker histone H1 and H5 family 0.02 OrthoFinder
lcl|BLLF01000464.1_cds_GFH12057.1_6534 HaLaN_07683, GFH12057 Histone H1/5 0.02 OrthoFinder
lcl|BLLF01001485.1_cds_GFH19571.1_14048 HaLaN_16536, GFH19571 Histone H1/5 0.02 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20408.1_5598 PRW20408 Histone H1 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
BP GO:0006470 protein dephosphorylation IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 24 89
No external refs found!