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  5. Cpa|evm.model.tig00001006.5

Cpa|evm.model.tig00001006.5 (tig00001006_g6224.t1)


Aliases : tig00001006_g6224.t1

Description : ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0001542 (OrthoFinder) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001006.5
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021035.20 tig00021035_g17254.t1 No description available 0.03 OrthoFinder
Sro183_g079580.1 Contig3056.g24303 Cullin-9 0.03 OrthoFinder
Vocar.0019s0261.1 32892807 IBR domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002867 IBR_dom 617 677
IPR027370 Znf-RING_LisH 544 575
No external refs found!