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  5. Cz04g37090.t1

Cz04g37090.t1


Description : Translation initiation factor IF6 [Interproscan].


Gene families : OG_01_0003846 (OrthoFinder) Phylogenetic Tree(s): OG0003846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g37090.t1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cre13.g585150 30784690, EIF6 Protein biosynthesis.translation initiation.eIF6... 0.06 OrthoFinder
PTI_01G03140.1 No alias Translation initiation factor IF6 [Interproscan]. 0.02 OrthoFinder
TP13G00330.1 No alias Translation initiation factor IF6 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58098 58098 Translation initiation factor IF6 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0043.1 32884379 Translation initiation factor IF6 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0042256 mature ribosome assembly IEA Interproscan
MF GO:0043022 ribosome binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002769 eIF6 4 203
No external refs found!