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  5. Cz04g36010.t1

Cz04g36010.t1


Description : DNA photolyase, N-terminal [Interproscan].


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g36010.t1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
EOD19626 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
EOD24687 No alias Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. 0.04 OrthoFinder
OT_01G06510.1 No alias DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
Sro580_g170080.1 Contig2039.g17523 Deoxyribodipyrimidine photo-lyase 0.02 OrthoFinder
SymbC1.scaffold2062.2 2062.2 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
SymbC1.scaffold4194.2 4194.2 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7003.2 7003.2 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0198.1 32890551 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.03 OrthoFinder
XM_002503843.1 MICPUN_59952, 59952 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493825.1_4587 KAA8493825 Cryptochrome DASH, chloroplastic/mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 25 115
No external refs found!