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  5. Cz04g35200.t1

Cz04g35200.t1


Description : Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan].


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g35200.t1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.69 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 OrthoFinder
Cpa|evm.model.tig00020965.70 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 OrthoFinder
Cre02.g078939 30785814 Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 OrthoFinder
EOD19626 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.04 OrthoFinder
EOD24687 No alias Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. 0.05 OrthoFinder
EOD31738 No alias Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. 0.02 OrthoFinder
Sro580_g170080.1 Contig2039.g17523 Deoxyribodipyrimidine photo-lyase 0.03 OrthoFinder
SymbC1.scaffold2062.2 2062.2 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
SymbC1.scaffold4194.2 4194.2 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7003.2 7003.2 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56266 56266 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
Vocar.0002s0198.1 32890551 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.02 OrthoFinder
XM_002503843.1 MICPUN_59952, 59952 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58644.1_8078 PRW58644 Blue-light photoreceptor 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493825.1_4587 KAA8493825 Cryptochrome DASH, chloroplastic/mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 167 349
No external refs found!