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  5. Cz04g33110.t1

Cz04g33110.t1


Description : SNU66/SART1 family [Interproscan].


Gene families : OG_01_0003307 (OrthoFinder) Phylogenetic Tree(s): OG0003307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g33110.t1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
PTI_07G01970.1 No alias SNU66/SART1 family [Interproscan]. 0.03 OrthoFinder
Vocar.0019s0052.1 32892859 SNU66/SART1 family [Interproscan]. 0.02 OrthoFinder
XM_002506297.1 MICPUN_104310, 104310 SNU66/SART1 family [Interproscan]. 0.03 OrthoFinder
XM_003063441.1 MicpuC2_8996, 8996 SNU66/SART1 family [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60335.1_4742 PRW60335 SART-1 family DOT2 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 36 502
No external refs found!