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  5. Cpa|evm.model.tig00001003.32

Cpa|evm.model.tig00001003.32 (tig00001003_g6287.t1)


Aliases : tig00001003_g6287.t1

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit


Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001003.32
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre09.g394100 30781425, AP1S1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder
Dusal.0133s00027.1 33199133 AP complex, mu/sigma subunit [Interproscan]. 0.01 OrthoFinder
OT_10G02930.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
OT_16G00570.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
Sro782_g201730.1 Contig2391.g19597 AP-2 complex subunit sigma 0.02 OrthoFinder
Sro9_g007570.1 Contig4120.g31525 AP-1 complex subunit sigma 0.02 OrthoFinder
UNPLg00105.t1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
Vocar.0003s0186.1 32888981 AP complex, mu/sigma subunit [Interproscan]. 0.01 OrthoFinder
Vocar.0034s0064.1 32893003 AP complex, mu/sigma subunit [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002367.1_cds_GFH23805.1_18282 HaLaN_21486, GFH23805 AP complex subunit sigma 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 137
No external refs found!