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  5. Cz04g32140.t1

Cz04g32140.t1


Description : E3 ligase, CCCH-type zinc finger; Zinc finger, C3HC4 RING-type [Interproscan].


Gene families : OG_01_0002730 (OrthoFinder) Phylogenetic Tree(s): OG0002730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g32140.t1
Cluster HCCA: Cluster_131


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 6 26
IPR041367 Znf-CCCH_4 34 53
IPR018957 Znf_C3HC4_RING-type 225 278
No external refs found!