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  5. Cz04g25200.t1

Cz04g25200.t1


Description : SET domain [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g25200.t1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre15.g639056 30783645 No description available 0.02 OrthoFinder
EOD11074 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD22522 No alias SET domain; Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder
PTI_17G02830.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold8781.1 8781.1 SET domain [Interproscan]. 0.05 OrthoFinder
TP05G03200.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
XM_003058744.1 MicpuC2_57921, 57921 Set domain protein 0.02 OrthoFinder
lcl|BLLF01000019.1_cds_GFH06025.1_502 HaLaN_00585, GFH06025 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01003634.1_cds_GFH27819.1_22296 HaLaN_26201, GFH27819 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01009141.1_cds_GFH33630.1_28107 HaLaN_33028, GFH33630 SET domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 38 86
No external refs found!