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  5. Cz04g21140.t1

Cz04g21140.t1


Description : Brix domain [Interproscan].


Gene families : OG_01_0003098 (OrthoFinder) Phylogenetic Tree(s): OG0003098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g21140.t1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.22 tig00020848_g14549.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre10.g454100 30790171 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
OT_14G00170.1 No alias Brix domain [Interproscan]. 0.03 OrthoFinder
Sro946_g223250.1 Contig2147.g18085 Nucleolar ribonucleoprotein protein IMP4 0.02 OrthoFinder
TP19G00980.1 No alias Brix domain [Interproscan]. 0.01 OrthoFinder
XM_002505531.1 MICPUN_87683, 87683 Brix domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000589.1_cds_GFH13237.1_7714 HaLaN_09078, GFH13237 Brix domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007109 Brix 90 260
No external refs found!