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  5. Cz04g20180.t1

Cz04g20180.t1


Description : SET domain [Interproscan].


Gene families : OG_01_0004237 (OrthoFinder) Phylogenetic Tree(s): OG0004237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g20180.t1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Cre17.g742700 30781655 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder
OT_11G01330.1 No alias SET domain; Zinc finger, CW-type [Interproscan]. 0.02 OrthoFinder
Sro891_g216830.1 Contig564.g7159 Lysine N-methyltransferase ATXR3 0.02 OrthoFinder
Vocar.0030s0042.1 32894536 SET domain [Interproscan]. 0.02 OrthoFinder
XM_002500261.1 MICPUN_55677, 55677 Set domain protein 0.05 OrthoFinder
XM_003063728.1 MicpuC2_48922, 48922 Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
CC GO:0000139 Golgi membrane IEP Enrichment
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006906 vesicle fusion IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016050 vesicle organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Enrichment
BP GO:0048284 organelle fusion IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0061025 membrane fusion IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090174 organelle membrane fusion IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 808 869
No external refs found!