Description : Ribosomal protein S18 [Interproscan].
Gene families : OG_01_0004123 (OrthoFinder) Phylogenetic Tree(s): OG0004123_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cz04g14230.t1 | |
Cluster | HCCA: Cluster_49 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
TPCG00780.1 | No alias | Ribosomal protein S18 [Interproscan]. | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Enrichment |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
BP | GO:0002949 | tRNA threonylcarbamoyladenosine modification | IEP | Enrichment |
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Enrichment |
CC | GO:0005739 | mitochondrion | IEP | Enrichment |
CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Enrichment |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0008033 | tRNA processing | IEP | Enrichment |
MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
CC | GO:0016592 | mediator complex | IEP | Enrichment |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
MF | GO:0051087 | chaperone binding | IEP | Enrichment |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
BP | GO:0070525 | tRNA threonylcarbamoyladenosine metabolic process | IEP | Enrichment |
MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001648 | Ribosomal_S18 | 188 | 236 |
No external refs found! |