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Aliases : tig00001001_g6200.t1
Description : Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-A cofactor
Gene families : OG_01_0004213 (OrthoFinder) Phylogenetic Tree(s): OG0004213_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00001001.10 | |
| Cluster | HCCA: Cluster_158 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro110_g055070.1 | Contig1501.g13730 | Tubulin binding cofactor A | 0.01 | OrthoFinder | |
| XM_002504040.1 | MICPUN_60354, 60354 | Tubulin binding cofactor A [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01002706.1_cds_GFH25065.1_19542 | HaLaN_22966, GFH25065 | Tubulin-specific chaperone A | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007021 | tubulin complex assembly | IEA | Interproscan |
| BP | GO:0007023 | post-chaperonin tubulin folding pathway | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| CC | GO:0005856 | cytoskeleton | IEP | Enrichment |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Enrichment |
| CC | GO:0005929 | cilium | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0007015 | actin filament organization | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0008154 | actin polymerization or depolymerization | IEP | Enrichment |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Enrichment |
| CC | GO:0015629 | actin cytoskeleton | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0030041 | actin filament polymerization | IEP | Enrichment |
| CC | GO:0031514 | motile cilium | IEP | Enrichment |
| CC | GO:0042995 | cell projection | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| BP | GO:0051258 | protein polymerization | IEP | Enrichment |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Enrichment |
| CC | GO:0120025 | plasma membrane bounded cell projection | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004226 | TBCA | 8 | 96 |
| No external refs found! |