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  5. Cz04g09260.t1

Cz04g09260.t1


Description : HEAT repeat associated with sister chromatid cohesion protein; Sister chromatid cohesion C-terminal domain [Interproscan].


Gene families : OG_01_0002465 (OrthoFinder) Phylogenetic Tree(s): OG0002465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g09260.t1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
OT_01G02270.1 No alias Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
OT_02G01680.1 No alias HEAT repeat associated with sister chromatid cohesion... 0.03 OrthoFinder
Sro1412_g270500.1 Contig422.g5670 Nipped-B-like protein 0.03 OrthoFinder
Transcript_contig_78212 78212 Sister chromatid cohesion C-terminal domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR026003 Cohesin_HEAT 424 465
IPR024986 Nipped-B_C 983 1155
No external refs found!