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  5. Cz04g09100.t1

Cz04g09100.t1


Description : Ribosomal protein L27e [Interproscan].


Gene families : OG_01_0004223 (OrthoFinder) Phylogenetic Tree(s): OG0004223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g09100.t1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021275.23 tig00021275_g19883.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 OrthoFinder
Cre17.g701650 30782062, RPL27 Protein biosynthesis.cytosolic ribosome.large subunit... 0.35 OrthoFinder
Dusal.2138s00001.1 33185794 Ribosomal protein L27e; KOW [Interproscan]. 0.15 OrthoFinder
EOD36904 No alias Ribosomal protein L27e [Interproscan]. 0.24 OrthoFinder
OT_05G00120.1 No alias KOW; Ribosomal protein L27e [Interproscan]. 0.14 OrthoFinder
PTI_01G09850.1 No alias Ribosomal protein L27e; KOW [Interproscan]. 0.3 OrthoFinder
Sro245_g097440.1 Contig3087.g24615 60S ribosomal protein L27 0.31 OrthoFinder
SymbC1.scaffold7526.4 7526.4 Ribosomal protein L27e [Interproscan]. 0.06 OrthoFinder
TP15G01980.1 No alias Ribosomal protein L27e [Interproscan]. 0.25 OrthoFinder
Vocar.0004s0217.1 32889937 Ribosomal protein L27e; KOW [Interproscan]. 0.1 OrthoFinder
XM_002504400.1 MICPUN_107054, 107054 Ribosomal protein L27e [Interproscan]. 0.31 OrthoFinder
XM_003059887.1 MicpuC2_34421, 34421 Ribosomal protein L27e [Interproscan]. 0.13 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05844.1_6023 PRW05844 60S ribosomal L27-3-like 0.12 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495086.1_3616 KAA8495086 60S ribosomal protein L27-B 0.24 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 42 125
No external refs found!