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  5. Cz04g07220.t1

Cz04g07220.t1


Description : Helix-hairpin-helix domain; DNA recombination and repair protein Rad51-like, C-terminal [Interproscan].


Gene families : OG_01_0000338 (OrthoFinder) Phylogenetic Tree(s): OG0000338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g07220.t1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278151 30779436 DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre14.g622850 30776108 DNA damage response.BRCC DNA-damage response... 0.04 OrthoFinder
EOD18508 No alias Rad51 DNA recombinase [Ensembl]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042546 cell wall biogenesis IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 85 339
No external refs found!