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  5. Cz04g06140.t1

Cz04g06140.t1


Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0010927 (OrthoFinder) Phylogenetic Tree(s): OG0010927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g06140.t1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cre06.g257600 30778913, FA1 No description available 0.02 OrthoFinder
Dusal.1020s00001.1 33196584 Leucine-rich repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 1539 1561
IPR001611 Leu-rich_rpt 1410 1431
IPR001611 Leu-rich_rpt 1297 1318
IPR001611 Leu-rich_rpt 1326 1346
IPR001611 Leu-rich_rpt 1467 1485
No external refs found!