Cz03g35210.t1

Description : Proliferating cell nuclear antigen, PCNA, C-terminal; Proliferating cell nuclear antigen, PCNA, N-terminal [Interproscan].

Gene families : OG_01_0001486 (OrthoFinder) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz03g35210.t1
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020553.141	tig00020553_g10631.t1	Cell cycle.interphase.DNA...	0.08	OrthoFinder
Cpa\|evm.model.tig00021319.67	tig00021319_g20259.t1	Cell cycle.interphase.DNA...	0.07	OrthoFinder
Cre12.g515850	30793407, PCN1	Cell cycle.interphase.DNA...	0.07	OrthoFinder
Dusal.0073s00022.1	33194576	Proliferating cell nuclear antigen, PCNA, C-terminal;...	0.03	OrthoFinder
OT_06G02920.1	No alias	Proliferating cell nuclear antigen, PCNA, C-terminal;...	0.03	OrthoFinder
PTI_15G02900.1	No alias	Proliferating cell nuclear antigen, PCNA, C-terminal;...	0.03	OrthoFinder
TP03G00410.1	No alias	Proliferating cell nuclear antigen, PCNA, N-terminal;...	0.04	OrthoFinder
Transcript_contig_58808	58808	Proliferating cell nuclear antigen, PCNA, C-terminal;...	0.01	OrthoFinder
Vocar.0006s0320.1	32894384	Proliferating cell nuclear antigen, PCNA, N-terminal;...	0.02	OrthoFinder
Vocar.0006s0321.1	32893962	Proliferating cell nuclear antigen, PCNA, N-terminal;...	0.02	OrthoFinder
XM_002500833.1	MICPUN_93665, 93665	Proliferating cell nuclear antigen, PCNA, N-terminal;...	0.05	OrthoFinder
XM_003059418.1	MicpuC2_33859, 33859	Proliferating cell nuclear antigen, PCNA, C-terminal;...	0.05	OrthoFinder
lcl\|LHPG02000011.1_cds_PRW45431.1_1402	PRW45431	Proliferating cell nuclear antigen	0.05	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499918.1_8871	KAA8499918	Proliferating cell nuclear antigen	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006275	regulation of DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	Enrichment
CC	GO:0000444	MIS12/MIND type complex	IEP	Enrichment
CC	GO:0000775	chromosome, centromeric region	IEP	Enrichment
CC	GO:0000808	origin recognition complex	IEP	Enrichment
CC	GO:0000818	nuclear MIS12/MIND complex	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0006401	RNA catabolic process	IEP	Enrichment
BP	GO:0006487	protein N-linked glycosylation	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007049	cell cycle	IEP	Enrichment
BP	GO:0007059	chromosome segregation	IEP	Enrichment
BP	GO:0007062	sister chromatid cohesion	IEP	Enrichment
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0018196	peptidyl-asparagine modification	IEP	Enrichment
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	Enrichment
BP	GO:0019439	aromatic compound catabolic process	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0031390	Ctf18 RFC-like complex	IEP	Enrichment
CC	GO:0032299	ribonuclease H2 complex	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Enrichment
BP	GO:0046700	heterocycle catabolic process	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0051301	cell division	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
CC	GO:0098687	chromosomal region	IEP	Enrichment
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR022648	Pr_cel_nuc_antig_N	1	124
IPR022649	Pr_cel_nuc_antig_C	127	254

External Links

No external refs found!

Cz03g35210.t1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation