1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz03g26140.t1

Cz03g26140.t1


Description : MIF4G-like, type 3 [Interproscan].


Gene families : OG_01_0000648 (OrthoFinder) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g26140.t1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.101 tig00000076_g2399.t1 Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.02 OrthoFinder
Cpa|evm.model.tig00021350.5 tig00021350_g20623.t1 Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.01 OrthoFinder
Cre12.g529950 30792112, EIF4G Eukaryotic translation initiation factor isoform 4G-2... 0.06 OrthoFinder
Cre17.g696250 30782553 Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.08 OrthoFinder
EOD41338 No alias MIF4G-like, type 3 [Interproscan]. 0.01 OrthoFinder
OT_03G00780.1 No alias MIF4G-like, type 3 [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0434.1 32894161 MIF4G-like, type 3; Initiation factor eIF-4 gamma, MA3... 0.03 OrthoFinder
XM_003062896.1 MicpuC2_42607, 42607 Eukaryotic initiation factor (EIF4G) 0.02 OrthoFinder
lcl|BLLF01000298.1_cds_GFH10238.1_4715 HaLaN_05516, GFH10238 MI domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61441.1_421 PRW61441 Eukaryotic translation initiation factor 4G 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56412.1_9894 PRW56412 Eukaryotic initiation factor 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 1475 1761
No external refs found!