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  5. Cz03g22070.t1

Cz03g22070.t1


Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g22070.t1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.3 tig00020902_g14946.t1 ABC transporter G family member 5 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cre04.g220850 30791308 ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre12.g530900 30792803 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cre17.g743547 30782472 ABC transporter G family member 21 OS=Arabidopsis thaliana 0.07 OrthoFinder
Cz06g03250.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.03 OrthoFinder
PTI_24G00260.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
Sro14_g010700.1 Contig1128.g10819 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Sro16_g011820.1 Contig916.g9619 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Sro997_g229380.1 Contig4588.g34260 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
SymbC1.scaffold193.5 193.5 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold4237.3 4237.3 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54121 54121 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
XM_002505455.1 MICPUN_103799, 103799 ATP-binding cassette superfamily 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 151 302
IPR013525 ABC_2_trans 546 756
No external refs found!