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  5. Cz03g22010.t1

Cz03g22010.t1


Description : MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan].


Gene families : OG_01_0003539 (OrthoFinder) Phylogenetic Tree(s): OG0003539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g22010.t1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020746.18 tig00020746_g13673.t1 Probable DNA helicase MCM8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre16.g665950 30776795, MCM8 Cell cycle.interphase.DNA replication.initiation.MCM8-9... 0.05 OrthoFinder
OT_12G00950.1 No alias MCM, AAA-lid domain; MCM domain; MCM OB domain [Interproscan]. 0.03 OrthoFinder
Sro371_g128600.1 Contig736.g8438 Helicase MCM8 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45145.1_1830 PRW45145 Putative DNA helicase MCM8 isoform X1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR041562 MCM_lid 590 674
IPR033762 MCM_OB 72 201
IPR001208 MCM_dom 295 509
No external refs found!