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  5. Cz03g02240.t1

Cz03g02240.t1


Description : ARID DNA-binding domain; SAND domain [Interproscan].


Gene families : OG_01_0000760 (OrthoFinder) Phylogenetic Tree(s): OG0000760_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g02240.t1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
EOD32041 No alias Chromo domain; SET domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR000770 SAND_dom 133 208
IPR000770 SAND_dom 797 866
IPR001606 ARID_dom 2 59
No external refs found!