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  5. Cz03g02050.t1

Cz03g02050.t1


Description : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; WW domain [Interproscan].


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g02050.t1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cz10g15120.t1 No alias Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.03 OrthoFinder
SymbC1.scaffold9146.1 9146.1 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.02 OrthoFinder
Vocar.0001s0414.1 32884474 CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 173 269
IPR001202 WW_dom 273 303
No external refs found!