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  5. Cz02g38270.t1

Cz02g38270.t1


Description : TAF6, C-terminal HEAT repeat domain; TATA box binding protein associated factor (TAF) [Interproscan].


Gene families : OG_01_0003054 (OrthoFinder) Phylogenetic Tree(s): OG0003054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g38270.t1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre07.g349950 30774453 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder
Dusal.0178s00009.1 33194012 TAF6, C-terminal HEAT repeat domain [Interproscan]. 0.02 OrthoFinder
Vocar.0023s0189.1 32883365 TATA box binding protein associated factor (TAF); TAF6,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR011442 TAF6_C 342 429
IPR004823 TAF_TATA-bd 7 66
No external refs found!