Sequence Description Alias PCC hrr Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component tig00022075_g23621.t1 0.9576607451831951 1 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.9481128143902215 2 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.9469093483189671 3 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.9414612455523029 9 Cpa|evm.model.tig00000980.5 tig00000980_g6130.t1 0.9381495878752978 5 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.9374321717934202 6 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.9369790216729598 7 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.9361290281917396 8 Cpa|evm.model.tig00000319.24 tig00000319_g24137.t1 0.9342414671012887 9 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.9338772564967912 10 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.9321958565346545 11 Cpa|evm.model.tig00000037.6 tig00000037_g10073.t1 0.9307602680915915 12 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.9277841467294728 25 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.9271959352507684 14 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.9265013564941456 15 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.9258585243240761 16 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.9248398130929482 17 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana tig00000704_g3322.t1 0.9244161587413064 18 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.9238112425489647 19 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana tig00021464_g21757.t1 0.9214292089343913 20 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component tig00021357_g20735.t1 0.9214045073193885 21 Cpa|evm.model.tig00000863.20 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component tig00000863_g4975.t1 0.9210930885830032 22 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.9198750320875351 23 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.9197407340742072 24 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.9197238342617764 25 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.9188325479074423 26 Cpa|evm.model.tig00021589.1 tig00021589_g22707.t1 0.9159531208307298 27 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.9132118632290482 28 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana tig00000144_g9159.t1 0.9123320926141499 29 Cpa|evm.model.tig00000402.27 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component tig00000402_g205.t1 0.9118548452059875 30 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.9108647679917081 31 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.910610321263191 38 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii tig00000912_g5414.t1 0.9105262455530435 39 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 tig00000704_g3318.t1 0.909455080595342 34 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.9091626647821551 35 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00021357_g20757.t1 0.9073827297539454 36 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.9073153935550958 38 Cpa|evm.model.tig00020538.72 tig00020538_g10378.t1 0.9058010956118829 38 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor tig00000829_g4659.t1 0.9054226747444767 39 Cpa|evm.model.tig00000692.67 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD1 component tig00000692_g3266.t1 0.9050252696853521 40 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana tig00000912_g5433.t1 0.9049498153534455 41 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides tig00020531_g10062.t1 0.9047625934854906 42 Cpa|evm.model.tig00001003.41 tig00001003_g6295.t1 0.9042399853030832 43 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.9040921885858408 44 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.9038072851442676 45 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase tig00001049_g6659.t1 0.9031433375121672 46 Cpa|evm.model.tig00020539.41 tig00020539_g10434.t1 0.9031242287850183 47 Cpa|evm.model.tig00021357.26 tig00021357_g20756.t1 0.9030765678257746 48 Cpa|evm.model.tig00000704.50 tig00000704_g3337.t1 0.9023502458685289 49 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 tig00021589_g22717.t1 0.9017571650791754 50 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana tig00000217_g19173.t1 0.9017065291454173 51 Cpa|evm.model.tig00020544.4 tig00020544_g10484.t1 0.9003826527444095 52 Cpa|evm.model.tig00000194.23 tig00000194_g14751.t1 0.9002535831065213 53 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.899687933238091 54 Cpa|evm.model.tig00001049.13 tig00001049_g6663.t1 0.8990013680814143 55 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica tig00020903_g15085.t1 0.8989926185578345 56 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component tig00021589_g22732.t1 0.8988960989182616 57 Cpa|evm.model.tig00021612.34 tig00021612_g22877.t1 0.898844805707713 58 Cpa|evm.model.tig00000383.37 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia tig00000383_g24647.t1 0.8979736764866428 59 Cpa|evm.model.tig00020723.4 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1 PIC assembly factor tig00020723_g13423.t1 0.8977697093334337 60 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.897689530934966 61 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor tig00020903_g15115.t1 0.8973787128939212 62 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component tig00021352_g20713.t1 0.8973674150807833 63 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.8968745743237221 64 Cpa|evm.model.tig00020553.154 tig00020553_g10645.t1 0.8968390577073111 65 Cpa|evm.model.tig00020554.27 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.RBL component tig00020554_g10812.t1 0.8956665054521966 66 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.8950615949479234 67 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor tig00000704_g3350.t1 0.8949382950029368 68 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component tig00021612_g22890.t1 0.8942987917396316 69 Cpa|evm.model.tig00000444.11 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.small subunit tig00000444_g801.t1 0.8940817084836484 70 Cpa|evm.model.tig00000241.28 U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana tig00000241_g20886.t1 0.8938818773511232 71 Cpa|evm.model.tig00001085.12 tig00001085_g6953.t1 0.8938120106708487 72 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.8935269375249519 73 Cpa|evm.model.tig00020553.139 tig00020553_g10629.t1 0.8933138736940216 74 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.8931582037746272 75 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.8929523393489532 76 Cpa|evm.model.tig00000203.30 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud13 component tig00000203_g17137.t1 0.8929505595121107 77 Cpa|evm.model.tig00021464.49 Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana tig00021464_g21753.t1 0.892740293150435 78 Cpa|evm.model.tig00020848.76 0.8919525927436975 79 Cpa|evm.model.tig00020554.15 tig00020554_g10801.t1 0.8914609911197467 80 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica tig00020684_g12886.t1 0.8907616955044442 81 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.8906061039799428 82 Cpa|evm.model.tig00001372.8 0.8905453619484506 83 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.8902434976419118 84 Cpa|evm.model.tig00020780.13 tig00020780_g13765.t1 0.8898170619900622 85 Cpa|evm.model.tig00000144.24 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana tig00000144_g9013.t1 0.8887820052599127 86 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component tig00000037_g10102.t1 0.8887053106296253 87 Cpa|evm.model.tig00000789.40 tig00000789_g4133.t1 0.8880014516623513 88 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00020918_g15889.t1 0.8878752329836778 89 Cpa|evm.model.tig00021464.50 tig00021464_g21754.t1 0.8875867761284275 90 Cpa|evm.model.tig00020780.62 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD2 component tig00020780_g13811.t1 0.8873718701187826 91 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana tig00020544_g10489.t1 0.8871183860288552 92 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.8864280863196446 93 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000350_g24328.t1 0.8863573640896446 94 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3326.t1 0.8862734490889271 95 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.8851004843562038 96 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.8848904081436278 97 Cpa|evm.model.tig00000388.24 tig00000388_g24785.t1 0.884883131714781 98 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.8846682481375364 99 Cpa|evm.model.tig00021234.15 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component tig00021234_g19389.t1 0.8837333092112729 100